I don't think any of those things should effect the shrimp. IME identical tanks develop along different trajectories to different stable conditions that will contain a particular biochemistry and micro-flora and fauna. Sometimes all you need to do is shake things up a bit and send the tank off in a different direction to a new stable state that is hopefully more favourable to the shrimp. This could be as simple as moving the shrimp to a bucket, draining the water and do a new scape.
If you don't want to bother catching all the shrimp you can still do a lot of moving things around leaving the tank running - e.g. gravel vac the substrate to remove a lot of "mud", take the wood out - sun dry it, then put it back in in a new spot, maybe a new globe in the light if you can (or swap the lights with another tank to change the colour temperature). Redirect the outflow from the filter to flow the water in a new direction. Some new plants.
In other words just change things up... a new start with all the same gear. Nothing to lose.